flowr - Streamlining Design and Deployment of Complex Workflows
This framework allows you to design and implement complex pipelines, and deploy them on your institution's computing cluster. This has been built keeping in mind the needs of bioinformatics workflows. However, it is easily extendable to any field where a series of steps (shell commands) are to be executed in a (work)flow.
Last updated 4 years ago
bioinformaticscloudclusterflowrpipelinetsvworkflow
7.17 score 83 stars 60 scripts 298 downloadsparams - Simplify Parameters
An interface to simplify organizing parameters used in a package, using external configuration files. This attempts to provide a cleaner alternative to options().
Last updated 2 years ago
5.26 score 4 stars 1 packages 301 scripts 296 downloadsfunr - Simple Utility Providing Terminal Access to all R Functions
A small utility which wraps Rscript and provides access to all R functions from the shell.
Last updated 4 years ago
5.25 score 34 stars 104 scripts 272 downloadspipefittr - Convert Nested Functions to Pipes
To take nested function calls and convert them to a more readable form using pipes from package 'magrittr'.
Last updated 8 years ago
1.70 score 3 scripts 99 downloads